Research Areas
Advancing computational biology through four interconnected research directions, each powering one of our foundation models.
Knowledge-Guided Discovery
Multi-modal knowledge extraction from scientific literature, databases, and experimental data. Our Research model leverages structured and unstructured biological knowledge to surface insights that would take human researchers months to compile.
Applications
Related Open-Source Tools
Physics-Informed Dynamics
Thermodynamically-constrained cellular behavior modeling that respects fundamental biological principles. Our Dynamics model learns from diverse cellular data while enforcing physical plausibility for reliable predictions.
Applications
Genetic Information Flow
Multi-scale modeling from DNA to RNA to protein, capturing the full central dogma of molecular biology. Our Central Dogma model predicts how genetic sequences translate into functional proteins with quantified confidence.
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Design Space Optimization
Efficient navigation of combinatorial genetic design spaces using advanced optimization and generative methods. Our Perturbation model suggests minimal, high-impact edits to achieve desired phenotypes across multiple objectives.
Applications
Related Open-Source Tools
Publications
Coming soon. Our team is preparing manuscripts for submission.
In the meantime, explore our open-source tools which demonstrate our research methods.
Explore Our Open-Source Ecosystem
Our research is grounded in open-source tools built on JAX/Flax NNX, freely available under the MIT license.
Interested in Collaborating?
We work with academic labs and industry partners to advance computational biology. Get in touch to explore collaboration opportunities.